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项目描述

BioJava aims to provide a comprehensive set of Java components for the rapid development of applications in Bioinformatics. It contains interfaces for representing Sequences, Features, and other important bioinformatics concepts. It can also read and write sequence data in a variety of common formats and communicate with Ensembl databases and with DAS and BioCorba servers.

系统要求

System requirement is not defined
Information regarding Project Releases and Project Resources. Note that the information here is a quote from Freecode.com page, and the downloads themselves may not be hosted on OSDN.

2002-03-15 16:35
1.21

此版本包括通用序列数据BioSQL序列数据库存储(读,写),增加了失踪Blast2Html演示,并包括各种文件修正。
标签: Minor feature enhancements
This release includes general-purpose sequence data storage in BioSQL sequence databases (read and write), adds the missing Blast2Html demo, and includes various documentation fixes.

2002-02-13 17:41
1.20

BioJava 1.2包括相当大的增强高炉输出和序列文件格式的解析器。另外还有一种改进的动态规划方案,它可以隐马尔可夫模型编译为Java字节码,并支持分布式注释系统1.00。
标签: Major feature enhancements
BioJava 1.2 includes considerable enhancements to the parsers for
Blast output and sequence file formats. There's also an improved
dynamic programming package, which can compile Hidden Markov Models to
Java bytecode, and support for the Distributed Annotation System 1.00.

2001-02-16 21:48
1.10

可插拔的I / O框架序列数据,高炉和FASTA格式输出,为支持生物序列的组装,以及一个变更通知和否决权的普遍事件模型分析器。
标签: Major feature enhancements
Pluggable I/O framework for sequence data, parsers for Blast and FASTA output, support for assembly of biological sequences, and a pervasive event model for change notification and veto.

2001-01-30 15:12
1.01

有些错误是固定与javac 1.3和JBuilder编译。 FASTA格式的文件中已说明行支持加入。 SimpleDistributions现在可以适当训练。
Some bugs were fixed with compiling with javac 1.3 and JBuilder. Support for longer description lines in FASTA files was added. SimpleDistributions can now be trained properly.

2001-01-30 15:12
1.0

最初的版本。
Initial release.

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