ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families.
Latest 5 files |
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| 名称 | 大小 | 日期 | 下载总数 |
| ncPRO-seq.v1.6.5.tar.gz | 6.7 MB | 2016-01-22 19:11 | 3 |
| ncPRO-seq.v1.6.4.tar.gz | 6.7 MB | 2016-01-11 23:52 | 2 |
| ncPRO-seq.v1.6.3_Docker_galaxy.tar.gz | 6.7 MB | 2015-11-26 23:50 | 2 |
| Dockerfile | 3.0 KB | 2015-10-28 19:44 | 29 |
| README | 2.5 KB | 2015-10-21 23:38 | 2 |
全文件 |
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| ncPRO-seq.v1.6.5.tar.gz | 6.7 MB | 2016-01-22 19:11 | 3 |
| ncPRO-seq.v1.6.4.tar.gz | 6.7 MB | 2016-01-11 23:52 | 2 |
| ncPRO-seq.v1.6.1.tar.gz | 6.7 MB | 2015-05-19 18:04 | 13 |
| ncPRO-seq.v1.5.1.tar.gz | 7.6 MB | 2012-09-25 17:10 | 16 |
| ncPRO-seq.v1.5.0.tar.gz | 7.6 MB | 2012-08-11 00:53 | 10 |
| ncPRO-seq.v1.3.1.tar.gz | 7.4 MB | 2012-07-11 17:37 | 3 |
| ncPRO-seq.v1.3.0.tar.gz | 7.4 MB | 2012-07-11 17:35 | 4 |
| ncPRO-seq.v1.1.tar.gz | 6.5 MB | 2012-02-04 03:32 | 9 |
| ncPRO-seq.v1.0.tar.gz | 7.8 MB | 2012-01-03 01:51 | 14 |
| ncPRO-seq.v1.6.3_Docker_galaxy.tar.gz | 6.7 MB | 2015-11-26 23:50 | 2 |
| Dockerfile | 3.0 KB | 2015-10-28 19:44 | 29 |
| README | 2.5 KB | 2015-10-21 23:38 | 2 |
| ncPRO-seq.v1.6.3_Docker.tar.gz | 6.7 MB | 2015-10-21 23:27 | 1 |
| install_ncPRO_seq_VM.sh | 1.6 KB | 2015-10-16 17:40 | 0 |
| ncPRO-seq.v1.6.3_VM.tar.gz | 6.7 MB | 2015-10-15 22:41 | 0 |
| rat_rn5.tar.gz | 100.4 MB | 2015-10-15 18:04 | 0 |
| human_hg19.tar.gz | 118.9 MB | 2015-10-15 17:57 | 23 |
| mouse_mm9.tar.gz | 197.4 MB | 2015-10-15 17:55 | 4 |
| mouse_mm10.tar.gz | 108.3 MB | 2015-07-03 17:48 | 8 |
| zebrafish_Zv9.tar.gz | 75.8 MB | 2015-01-12 17:46 | 7 |
| athaliana_TAIR9.tar.gz | 3.2 MB | 2012-08-08 01:50 | 12 |
| chicken_galGal3.tar.gz | 10.2 MB | 2012-07-10 17:54 | 8 |
| zebrafinch_taeGut1.tar.gz | 9.7 MB | 2012-02-04 02:57 | 11 |
| rat_rn4.tar.gz | 90.3 MB | 2012-02-04 02:57 | 3 |
| platypus_ornAna1.tar.gz | 89.8 MB | 2012-02-04 02:55 | 11 |
| opossum_monDom5.tar.gz | 144.2 MB | 2012-02-04 02:52 | 5 |
| macaca_rheMac2.tar.gz | 89.3 MB | 2012-02-04 02:48 | 4 |
| horse_equCab2.tar.gz | 69.4 MB | 2012-02-04 02:45 | 4 |
| dog_canFam2.tar.gz | 82.8 MB | 2012-02-04 02:44 | 8 |
| dmelanogaster_dm3.tar.gz | 5.5 MB | 2012-02-04 02:42 | 9 |
| cow_bosTau4.tar.gz | 102.6 MB | 2012-02-04 02:41 | 6 |
| celegans_ce6.tar.gz | 6.2 MB | 2012-02-04 02:39 | 7 |
| manual_v1.6.1.pdf | 1.1 MB | 2015-04-14 17:56 | 28 |
| manual_v1.5.0.pdf | 1.1 MB | 2012-08-10 23:35 | 13 |
| manual_v1.3.0.pdf | 1.1 MB | 2012-05-31 19:01 | 25 |
| manual_v1.0.pdf | 878.5 KB | 2012-02-04 03:04 | 35 |
| ncPRO-seq-testdata.fastq | 13.3 MB | 2011-12-31 00:02 | 17 |
